Installation Instructions

We recommend using an new independent environment with python3.8, as used during development and testing of gpmap-tools to minimize problems with dependencies. For instance, one can create and activate a new conda environment as follows:

$ conda create -n gpmap python=3.8
$ conda activate gpmap

gpmap-tools is available in PyPI and installable through pip package manager:

$ pip install gpmap-tools

You can also install the latest or specific versions from GitHub as follows:

$ git clone https://github.com/cmarti/gpmap-tools.git

and install it in the current python environment:

$ cd gpmap-tools
$ pip install .

For developers, tests can be run with using pytest:

$ pytest test